r/genomics • u/Ok_Fun_3768 • 7d ago

I built a free, comprehensive tutorial site for scRNA-seq, HPC, and Bioinformatics (Scanpy & Seurat)

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The Omics Hub is a free learning resource for people starting with computational genomics and scRNA-seq workflows: https://theomicshub.com/

It is designed for learners with biology experience who are new to the command line, HPC environments, and analysis steps such as QC, normalization, clustering, and interpretation. It includes examples in R/Seurat and Python/Scanpy to provide a structured route into genomic-data analysis.

This is my own work, designed from my notebooks, notes, practical workflow experience, and skills. I used AI only to assist with organizing or drafting some sections, while retaining authorship and technical review. I welcome specific technical feedback on missing references, unclear assumptions, version-sensitive steps, or concepts that need clearer explanation.

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u/Ok-Mathematician8461 7d ago

Serious question - does it just assume 10X? Or is it useful for people working with other data sources?

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u/Ok_Fun_3768 7d ago

I didn’t include preprocessing part which is different accordingly

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u/Ok_Fun_3768 7d ago

But downstream analysis are same.

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u/Struggle_Wise 7d ago

This is awesome. Thank you for sharing.

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u/Dense_Grapefruit9470 7d ago

This is exactly the sort of thing I needed two years ago when all I had was a terminal and pure confusion.